Only PreSonus Studio 192 and Quantum products can remotely control the DP88 Preamps over ADAT Lightpipe.
For 3rd party interfaces such as your Apogee, you'll need to acquire a USB to MIDI Interface to connect from your computer to the DP88 MIDI Inputs. Then from within your DAW you can send MIDI Commands to control it.
Review page 5 in the DP88 user guide to see MIDI Commands: