hi nesbetthaynie,
here it is shown how to record these midi notesbut it is inAbleton. S1 should be similar.
https://www.youtube.com/results?search_query=Using+NI+Komplete+Kontrol%E2%80%99s+Scale
My KK Mk2 only works in Standalone. How did you set up the Instrument in the Midi configurations in S1?
Did you took the Mackie Control or did you connected it via a normal external device?
regards Laurent